Basic Information
Gene ID
Pop_A02G066105
Position
chrA02:13399964-13402721 (-)
2757bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Organism
Also AS Potri.002G122700AT4G34200Potri.002G122700.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_A08G007010 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Pop_G08G007359 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Pop_G10G006260 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Regulatory gene
Pop_A01G004498 Tesmin/TSO1-like CXC domain
Pop_A01G032290 tesmin TSO1-like CXC
Pop_A01G056931 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00270 Cysteine and methionine metabolism Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD:M00021]. In animals, methionine-derived homocysteine is used as sulfur source and its condensation product with serine (cystathionine) is converted to cysteine [MD:M00338]. Cysteine is metabolized to pyruvate in multiple routes. Methionine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, methionine is synthesized from aspartate [MD:M00017]. S-Adenosylmethionine (SAM), synthesized from methionine and ATP, is a methyl group donor in many important transfer reactions including DNA methylation for regulation of gene expression. SAM may also be used to regenerate methionine in the methionine salvage pathway [MD:M00034].
map00260 Glycine, serine and threonine metabolism Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].