Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_A04G028302
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Position
chrA04:5085986-5088254 (-)
2268bp
Gene Type
gene
Gene Description (Protein Product)
Protein BASIC PENTACYSTEINE4-like
Organism
Populus alba x Populus glandulosa
Also AS Potri.004G163700AT2G21240Potri.004G163700.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G02G065108 Protein BASIC PENTACYSTEINE6-like
Pop_A05G001956 Protein BASIC PENTACYSTEINE6-like
Pop_G05G057223 Protein BASIC PENTACYSTEINE6-like
Regulatory gene
Pop_A01G003954 Homeobox-leucine zipper protein
Pop_A01G004152 Homeobox-leucine zipper protein
Pop_A01G004498 Tesmin/TSO1-like CXC domain
Target gene
Pop_A01G000041 transposition, RNA-mediated
Pop_A01G000042 transposition, RNA-mediated
Pop_A01G000043 Encoded by

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0008150 biological_process BP
GO:0009719 response to endogenous stimulus BP
GO:0009723 response to ethylene BP
GO:0009725 response to hormone BP
GO:0010033 response to organic substance BP
GO:0042221 response to chemical BP
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043565 sequence-specific DNA binding MF
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046983 protein dimerization activity MF
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050896 response to stimulus BP
GO:0065007 biological regulation BP
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF