PPGR - Gene Detail

Gene ID	Pop_A04G030639 View in Genome Browser
Position	chrA04:7339835-7342412 (+) 2577bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the iron ascorbate-dependent oxidoreductase family
Organism	Populus alba x Populus glandulosa
Also AS	Potri.004G139600AT5G08640Potri.004G139600.v4.1

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	Pop_G02G065186 Bifunctional dihydroflavonol 4-reductase flavanone Pop_G05G057295 Bifunctional dihydroflavonol 4-reductase flavanone Pop_A05G001883 Bifunctional dihydroflavonol 4-reductase flavanone
Regulatory gene	Pop_A01G003796 isoform X1 Pop_A01G003801 transcription factor Pop_A01G003952 transcription factor

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009314	response to radiation	BP
GO:0009416	response to light stimulus	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009733	response to auxin	BP
GO:0009812	flavonoid metabolic process	BP
GO:0009813	flavonoid biosynthetic process	BP
GO:0010033	response to organic substance	BP
GO:0016491	oxidoreductase activity	MF
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	MF
GO:0016706	2-oxoglutarate-dependent dioxygenase activity	MF
GO:0042221	response to chemical	BP
GO:0042440	pigment metabolic process	BP
GO:0045431	flavonol synthase activity	MF
GO:0046148	pigment biosynthetic process	BP
GO:0050896	response to stimulus	BP
GO:0051213	dioxygenase activity	MF
GO:0051552	flavone metabolic process	BP
GO:0051553	flavone biosynthetic process	BP
GO:0051554	flavonol metabolic process	BP
GO:0051555	flavonol biosynthetic process	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0071704	organic substance metabolic process	BP
GO:0080167	response to karrikin	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901615	organic hydroxy compound metabolic process	BP
GO:1901617	organic hydroxy compound biosynthetic process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00941	Flavonoid biosynthesis	Flavonoids are a major class of plant secondary metabolites that serves a multitude of functions including pigments and antioxidant activity. Flavonoids are synthesized from phenylpropanoid derivatives by condensation with malonyl-CoA. For example, condensation of p-coumaroyl-CoA (C6-C3) with three malonyl-CoA (C3) molecules results in naringenin chalcone with a diphenylpropane (C6-C3-C6) unit, which is converted to naringenin with the flavone (2-phenylchromen-4-one) backbone by conjugate ring closure. These and further modifications yield a variety of structural forms including chalcones, flavanones, dihyroflavonols, and flavans, anthocyanins, flavones and flavonols, and isoflavonoids.