Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_A05G057056
View in Genome Browser
Position
chrA05:112594-113022 (-)
428bp
Gene Type
gene
Gene Description (Protein Product)
Calvin cycle protein CP12-3
Organism
Populus alba x Populus glandulosa
Also AS Potri.005G258400AT1G76560Potri.005G258400.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_A06G061765 Chlororespiratory reduction 6
Pop_G06G076152 Chlororespiratory reduction 6
Pop_G01G089309 Phosphoribulokinase
Regulatory gene
Pop_A01G002215 NAC domain-containing protein
Pop_A01G004084 NAC domain-containing protein
Pop_A01G004498 Tesmin/TSO1-like CXC domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005507 copper ion binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006109 regulation of carbohydrate metabolic process BP
GO:0006950 response to stress BP
GO:0008150 biological_process BP
GO:0009266 response to temperature stimulus BP
GO:0009408 response to heat BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009628 response to abiotic stimulus BP
GO:0009889 regulation of biosynthetic process BP
GO:0009890 negative regulation of biosynthetic process BP
GO:0009892 negative regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010109 regulation of photosynthesis BP
GO:0010110 regulation of photosynthesis, dark reaction BP
GO:0016151 nickel cation binding MF
GO:0019222 regulation of metabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031324 negative regulation of cellular metabolic process BP
GO:0032991 protein-containing complex CC
GO:0033554 cellular response to stress BP
GO:0034059 response to anoxia BP
GO:0034605 cellular response to heat BP
GO:0036293 response to decreased oxygen levels BP
GO:0036294 cellular response to decreased oxygen levels BP
GO:0042221 response to chemical BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043255 regulation of carbohydrate biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045912 negative regulation of carbohydrate metabolic process BP
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0065007 biological regulation BP
GO:0070482 response to oxygen levels BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071453 cellular response to oxygen levels BP
GO:0071454 cellular response to anoxia BP
GO:0080090 regulation of primary metabolic process BP
GO:0080152 regulation of reductive pentose-phosphate cycle BP
GO:0080153 negative regulation of reductive pentose-phosphate cycle BP
GO:1905156 negative regulation of photosynthesis BP