PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Gene ID	Pop_A06G053387 View in Genome Browser
Position	chrA06:4537312-4540748 (-) 3436bp
Gene Type	gene
Gene Description (Protein Product)	Alpha/beta hydrolase family
Organism	Populus alba x Populus glandulosa
Also AS	Potri.006G219400AT4G33180Potri.006G219400.v4.1

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	Pop_G02G065772 calcium-binding protein Pop_G06G075924 Calmodulin-like protein Pop_A06G061660 Calmodulin-like protein
Regulatory gene	Pop_A01G005990 MADS-box transcription factor Pop_A01G056931 Dof zinc finger protein Pop_A01G059879 Dof zinc finger protein

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005618	cell wall	CC
GO:0005623	obsolete cell	CC
GO:0005886	plasma membrane	CC
GO:0008150	biological_process	BP
GO:0016020	membrane	CC
GO:0016787	hydrolase activity	MF
GO:0016822	hydrolase activity, acting on acid carbon-carbon bonds	MF
GO:0016823	hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances	MF
GO:0030312	external encapsulating structure	CC
GO:0034820	4,9-DSHA hydrolase activity	MF
GO:0040007	growth	BP
GO:0044110	obsolete growth involved in symbiotic interaction	BP
GO:0044116	biological process involved in interaction with host	BP
GO:0044117	biological process involved in interaction with host	BP
GO:0044403	biological process involved in symbiotic interaction	BP
GO:0044419	biological process involved in interspecies interaction between organisms	BP
GO:0044464	obsolete cell part	CC
GO:0051704	obsolete multi-organism process	BP
GO:0071944	cell periphery	CC