Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_A06G061681
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Position
chrA06:19256431-19263659 (+)
7228bp
Gene Type
gene
Gene Description (Protein Product)
Synaptotagmin-5-like
Organism
Populus alba x Populus glandulosa
Also AS Potri.006G063900AT1G05500Potri.006G063900.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G01G089250 Belongs to the syntaxin family
Pop_G03G013433 Belongs to the syntaxin family
Pop_G01G029458 -
Regulatory gene
Pop_A01G005990 MADS-box transcription factor
Pop_A01G025061 B3 DNA binding domain
Pop_A01G032239 B3 domain-containing transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005789 endoplasmic reticulum membrane CC
GO:0005886 plasma membrane CC
GO:0005887 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0009506 plasmodesma CC
GO:0009898 cytoplasmic side of plasma membrane CC
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0019897 extrinsic component of plasma membrane CC
GO:0019898 extrinsic component of membrane CC
GO:0030054 cell junction CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0031227 obsolete intrinsic component of endoplasmic reticulum membrane CC
GO:0031234 extrinsic component of cytoplasmic side of plasma membrane CC
GO:0031984 organelle subcompartment CC
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044232 organelle membrane contact site CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0055044 symplast CC
GO:0071944 cell periphery CC
GO:0098552 side of membrane CC
GO:0098562 cytoplasmic side of membrane CC
GO:0098827 endoplasmic reticulum subcompartment CC