Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_A09G029075
View in Genome Browser
Position
chrA09:5902982-5906163 (-)
3181bp
Gene Type
gene
Gene Description (Protein Product)
Ran-binding protein 1 homolog
Organism
Populus alba x Populus glandulosa
Also AS Potri.009G073400AT5G58590AT1G07140Potri.009G073400.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G06G003165 GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle
Pop_G06G003162 GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle
Pop_G18G078725 GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle
Regulatory gene
Pop_A01G003796 isoform X1
Pop_A01G003952 transcription factor
Pop_A01G004056 dnaJ homolog subfamily C member

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000082 G1/S transition of mitotic cell cycle BP
GO:0000226 microtubule cytoskeleton organization BP
GO:0000278 mitotic cell cycle BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0006403 RNA localization BP
GO:0006405 RNA export from nucleus BP
GO:0006508 proteolysis BP
GO:0006511 ubiquitin-dependent protein catabolic process BP
GO:0006606 protein import into nucleus BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0006913 nucleocytoplasmic transport BP
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0007049 cell cycle BP
GO:0007051 spindle organization BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008536 small GTPase binding MF
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009987 cellular process BP
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0015931 nucleobase-containing compound transport BP
GO:0016043 cellular component organization BP
GO:0017016 small GTPase binding MF
GO:0017038 protein import BP
GO:0019538 protein metabolic process BP
GO:0019899 enzyme binding MF
GO:0019941 modification-dependent protein catabolic process BP
GO:0022402 cell cycle process BP
GO:0030163 protein catabolic process BP
GO:0031267 small GTPase binding MF
GO:0033036 macromolecule localization BP
GO:0033365 protein localization to organelle BP
GO:0034504 protein localization to nucleus BP
GO:0034613 protein localization BP
GO:0042886 amide transport BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043632 modification-dependent macromolecule catabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044257 protein catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044265 cellular macromolecule catabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0044770 cell cycle phase transition BP
GO:0044772 mitotic cell cycle phase transition BP
GO:0044843 cell cycle G1/S phase transition BP
GO:0045184 establishment of protein localization BP
GO:0046907 intracellular transport BP
GO:0050657 nucleic acid transport BP
GO:0050658 RNA transport BP
GO:0051020 GTPase binding MF
GO:0051168 nuclear export BP
GO:0051169 nuclear transport BP
GO:0051170 import into nucleus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051236 establishment of RNA localization BP
GO:0051603 proteolysis involved in protein catabolic process BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0070727 cellular macromolecule localization BP
GO:0071702 organic substance transport BP
GO:0071704 organic substance metabolic process BP
GO:0071705 nitrogen compound transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072594 establishment of protein localization to organelle BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1903047 mitotic cell cycle process BP