Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_A10G069264
View in Genome Browser
Position
chrA10:6518775-6522139 (+)
3364bp
Gene Type
gene
Gene Description (Protein Product)
30S ribosomal protein S1
Organism
Populus alba x Populus glandulosa
Also AS Potri.010G150300AT5G30510Potri.010G150300.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G08G082281 DEAD-box ATP-dependent RNA helicase
Pop_G05G008425 Type I inositol 1,4,5-trisphosphate 5-phosphatase
Pop_G02G065473 Type I inositol 1,4,5-trisphosphate 5-phosphatase
Regulatory gene
Pop_A01G002215 NAC domain-containing protein
Pop_A01G004084 NAC domain-containing protein
Pop_A01G004576 NAC domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003729 mRNA binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0008150 biological_process BP
GO:0009507 chloroplast CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009579 thylakoid CC
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009735 response to cytokinin BP
GO:0010033 response to organic substance BP
GO:0016020 membrane CC
GO:0042221 response to chemical BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF
KEGG Term Name Description
map03010 Ribosome -