Basic Information
Gene ID
Pop_A15G049075
Position
chrA15:3149482-3153886 (-)
4404bp
Gene Type
gene
Gene Description (Protein Product)
snRNA import into nucleus
Organism
Also AS Potri.015G095400AT4G24880Potri.015G095400.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G16G068628 HEAT-like repeat
Pop_G06G051650 HEAT-like repeat
Pop_A16G090084 HEAT-like repeat
Regulatory gene
Pop_A01G003802 AP2-like ethylene-responsive transcription factor
Pop_A01G029538 AP2-like ethylene-responsive transcription factor
Pop_A01G056931 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.