Basic Information
Gene ID
Pop_A16G028734
Position
chrA16:5299379-5302895 (+)
3516bp
Gene Type
gene
Gene Description (Protein Product)
Ataxin-3 homolog
Organism
Also AS Potri.016G110300AT3G54130Potri.016G110300.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G05G068973 Belongs to the 14-3-3 family
Pop_G02G065949 Belongs to the 14-3-3 family
Pop_G05G068923 Belongs to the 14-3-3 family
Regulatory gene
Pop_A01G056931 Dof zinc finger protein
Pop_A01G059879 Dof zinc finger protein
Pop_A02G012400 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map04141 Protein processing in endoplasmic reticulum The endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylated. Correctly folded proteins are packaged into transport vesicles that shuttle them to the Golgi complex. Misfolded proteins are retained within the ER lumen in complex with molecular chaperones. Proteins that are terminally misfolded bind to BiP and are directed toward degradation through the proteasome in a process called ER-associated degradation (ERAD). Accumulation of misfolded proteins in the ER causes ER stress and activates a signaling pathway called the unfolded protein response (UPR). In certain severe situations, however, the protective mechanisms activated by the UPR are not sufficient to restore normal ER function and cells die by apoptosis.