Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_A16G055351
View in Genome Browser
Position
chrA16:11823062-11825836 (-)
2774bp
Gene Type
gene
Gene Description (Protein Product)
Protein LST8 homolog
Organism
Populus alba x Populus glandulosa
Also AS Potri.016G052800AT3G18140Potri.016G052800.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G15G015226 PP2A regulatory subunit
Pop_G12G073637 PP2A regulatory subunit
Pop_UnG015305 Zinc finger with UFM1-specific peptidase domain
Regulatory gene
Pop_A01G003796 isoform X1
Pop_A01G003952 transcription factor
Pop_A01G004056 dnaJ homolog subfamily C member

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0001932 regulation of protein phosphorylation BP
GO:0001934 positive regulation of protein phosphorylation BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005776 autophagosome CC
GO:0006935 chemotaxis BP
GO:0006950 response to stress BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007190 activation of adenylate cyclase activity BP
GO:0008064 regulation of actin polymerization or depolymerization BP
GO:0008150 biological_process BP
GO:0009267 cellular response to starvation BP
GO:0009605 response to external stimulus BP
GO:0009893 positive regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0010562 positive regulation of phosphorus metabolic process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010638 positive regulation of organelle organization BP
GO:0016043 cellular component organization BP
GO:0019220 regulation of phosphate metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0023052 signaling BP
GO:0030100 regulation of endocytosis BP
GO:0030587 sorocarp development BP
GO:0030832 regulation of actin filament length BP
GO:0030833 regulation of actin filament polymerization BP
GO:0030838 positive regulation of actin filament polymerization BP
GO:0031152 aggregation involved in sorocarp development BP
GO:0031252 cell leading edge CC
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031334 positive regulation of protein-containing complex assembly BP
GO:0031399 regulation of protein modification process BP
GO:0031401 positive regulation of protein modification process BP
GO:0031667 response to nutrient levels BP
GO:0031668 cellular response to extracellular stimulus BP
GO:0031669 cellular response to nutrient levels BP
GO:0031929 TOR signaling BP
GO:0031931 TORC1 complex CC
GO:0031932 TORC2 complex CC
GO:0032147 activation of protein kinase activity BP
GO:0032148 activation of protein kinase B activity BP
GO:0032268 regulation of protein metabolic process BP
GO:0032270 positive regulation of protein metabolic process BP
GO:0032271 regulation of protein polymerization BP
GO:0032273 positive regulation of protein polymerization BP
GO:0032502 developmental process BP
GO:0032535 regulation of cellular component size BP
GO:0032879 regulation of localization BP
GO:0032956 regulation of actin cytoskeleton organization BP
GO:0032970 regulation of actin filament-based process BP
GO:0032991 protein-containing complex CC
GO:0033043 regulation of organelle organization BP
GO:0033554 cellular response to stress BP
GO:0033674 positive regulation of kinase activity BP
GO:0035556 intracellular signal transduction BP
GO:0038201 TOR complex CC
GO:0040011 locomotion BP
GO:0042221 response to chemical BP
GO:0042325 regulation of phosphorylation BP
GO:0042327 positive regulation of phosphorylation BP
GO:0042330 taxis BP
GO:0042594 response to starvation BP
GO:0043085 positive regulation of catalytic activity BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043254 regulation of protein-containing complex assembly BP
GO:0043327 chemotaxis to cAMP BP
GO:0043519 regulation of myosin II filament organization BP
GO:0043520 regulation of myosin II filament assembly BP
GO:0043549 regulation of kinase activity BP
GO:0044087 regulation of cellular component biogenesis BP
GO:0044089 positive regulation of cellular component biogenesis BP
GO:0044093 positive regulation of molecular function BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0044764 obsolete multi-organism cellular process BP
GO:0045806 negative regulation of endocytosis BP
GO:0045859 regulation of protein kinase activity BP
GO:0045860 positive regulation of protein kinase activity BP
GO:0045937 positive regulation of phosphate metabolic process BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048523 negative regulation of cellular process BP
GO:0048856 anatomical structure development BP
GO:0050764 regulation of phagocytosis BP
GO:0050765 negative regulation of phagocytosis BP
GO:0050789 regulation of biological process BP
GO:0050790 regulation of catalytic activity BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051049 regulation of transport BP
GO:0051051 negative regulation of transport BP
GO:0051128 regulation of cellular component organization BP
GO:0051129 negative regulation of cellular component organization BP
GO:0051130 positive regulation of cellular component organization BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051174 regulation of phosphorus metabolic process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051247 positive regulation of protein metabolic process BP
GO:0051338 regulation of transferase activity BP
GO:0051347 positive regulation of transferase activity BP
GO:0051493 regulation of cytoskeleton organization BP
GO:0051495 positive regulation of cytoskeleton organization BP
GO:0051703 biological process involved in intraspecies interaction between organisms BP
GO:0051704 obsolete multi-organism process BP
GO:0051716 cellular response to stimulus BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060627 regulation of vesicle-mediated transport BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0065009 regulation of molecular function BP
GO:0071496 cellular response to external stimulus BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0090066 regulation of anatomical structure size BP
GO:0090702 socially cooperative development BP
GO:0098630 aggregation of unicellular organisms BP
GO:0098743 cell aggregation BP
GO:0099120 socially cooperative development BP
GO:0110053 regulation of actin filament organization BP
GO:1902903 regulation of supramolecular fiber organization BP
GO:1902905 positive regulation of supramolecular fiber organization BP