Basic Information
Gene ID
Pop_G01G029456
Position
chrG01:49127839-49129913 (-)
2074bp
Gene Type
gene
Gene Description (Protein Product)
Nuclear pore complex protein
Organism
Also AS Potri.001G001250AT1G55540Potri.001G001250.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G08G057927 Nuclear pore component
Pop_G10G007271 Nuclear pore component
Pop_G14G044493 Nsp1-like C-terminal region
Regulatory gene
Pop_A01G003796 isoform X1
Pop_A01G003801 transcription factor
Pop_A01G003952 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.