PPGR - Gene Detail

Basic Information

Gene ID	Pop_G01G058644 View in Genome Browser
Position	chrG01:13762759-13766352 (-) 3593bp
Gene Type	gene
Gene Description (Protein Product)	Protease Do-like 1
Organism	Populus alba x Populus glandulosa
Also AS	Potri.001G348800AT3G27925Potri.001G348800.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Pop_G01G067765 The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated

Pop_G03G001041 The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated

Pop_G05G072232 UPF0603 protein At1g54780, chloroplastic-like

Regulatory gene

Pop_A01G003796 isoform X1

Pop_A01G003952 transcription factor

Pop_A01G003954 Homeobox-leucine zipper protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004175	endopeptidase activity	MF
GO:0004252	serine-type endopeptidase activity	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0006091	generation of precursor metabolites and energy	BP
GO:0006508	proteolysis	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008233	peptidase activity	MF
GO:0008236	serine-type peptidase activity	MF
GO:0009056	catabolic process	BP
GO:0009057	macromolecule catabolic process	BP
GO:0009507	chloroplast	CC
GO:0009534	chloroplast thylakoid	CC
GO:0009535	chloroplast thylakoid membrane	CC
GO:0009536	plastid	CC
GO:0009579	thylakoid	CC
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009735	response to cytokinin	BP
GO:0009765	photosynthesis, light harvesting	BP
GO:0009987	cellular process	BP
GO:0010033	response to organic substance	BP
GO:0010206	photosystem II repair	BP
GO:0015979	photosynthesis	BP
GO:0016020	membrane	CC
GO:0016787	hydrolase activity	MF
GO:0017171	serine hydrolase activity	MF
GO:0019538	protein metabolic process	BP
GO:0019684	photosynthesis, light reaction	BP
GO:0030091	protein repair	BP
GO:0030163	protein catabolic process	BP
GO:0031976	plastid thylakoid	CC
GO:0031977	thylakoid lumen	CC
GO:0031984	organelle subcompartment	CC
GO:0034357	photosynthetic membrane	CC
GO:0042221	response to chemical	BP
GO:0042651	thylakoid membrane	CC
GO:0042802	identical protein binding	MF
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044436	obsolete thylakoid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0050896	response to stimulus	BP
GO:0055035	plastid thylakoid membrane	CC
GO:0070011	peptidase activity	MF
GO:0071704	organic substance metabolic process	BP
GO:0140096	catalytic activity, acting on a protein	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901565	organonitrogen compound catabolic process	BP
GO:1901575	organic substance catabolic process	BP