Basic Information
Gene ID
Pop_G01G090462
Position
chrG01:15122875-15124577 (-)
1702bp
Gene Type
gene
Gene Description (Protein Product)
Pectate lyase
Organism
Also AS Potri.001G339500AT3G27400Potri.001G339500.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G05G069963 Pectinesterase
Pop_G06G051338 pectinesterase pectinesterase inhibitor
Pop_G02G085487 Pectinesterase
Regulatory gene
Pop_A01G003796 isoform X1
Pop_A01G003801 transcription factor
Pop_A01G003924 Zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0008150 biological_process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009624 response to nematode BP
GO:0043207 response to external biotic stimulus BP
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -