Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G02G012074
View in Genome Browser
Position
chrG02:12312518-12324120 (-)
11602bp
Gene Type
gene
Gene Description (Protein Product)
E3 ubiquitin-protein ligase BRE1-like
Organism
Populus alba x Populus glandulosa
Also AS Potri.002G141300AT2G44950Potri.002G141300.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G19G009454 Belongs to the ubiquitin-conjugating enzyme family
Pop_G15G048721 Belongs to the ubiquitin-conjugating enzyme family
Pop_G13G071397 Belongs to the ubiquitin-conjugating enzyme family
Regulatory gene
Pop_A01G003796 isoform X1
Pop_A01G003924 Zinc finger protein
Pop_A01G003952 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0002376 immune system process BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004842 ubiquitin-protein transferase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0006325 chromatin organization BP
GO:0006464 protein modification process BP
GO:0006513 protein monoubiquitination BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006955 immune response BP
GO:0006996 organelle organization BP
GO:0007275 multicellular organism development BP
GO:0007346 regulation of mitotic cell cycle BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009620 response to fungus BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009791 post-embryonic development BP
GO:0009814 defense response to other organism BP
GO:0009817 defense response to fungus BP
GO:0009965 leaf morphogenesis BP
GO:0009987 cellular process BP
GO:0010016 shoot system morphogenesis BP
GO:0010154 fruit development BP
GO:0010162 seed dormancy process BP
GO:0010228 vegetative to reproductive phase transition of meristem BP
GO:0010389 regulation of G2/M transition of mitotic cell cycle BP
GO:0010390 histone monoubiquitination BP
GO:0010431 seed maturation BP
GO:0010564 regulation of cell cycle process BP
GO:0016043 cellular component organization BP
GO:0016567 protein ubiquitination BP
GO:0016569 obsolete covalent chromatin modification BP
GO:0016570 histone modification BP
GO:0016574 histone ubiquitination BP
GO:0016740 transferase activity MF
GO:0019538 protein metabolic process BP
GO:0019787 ubiquitin-like protein transferase activity MF
GO:0021700 developmental maturation BP
GO:0022414 reproductive process BP
GO:0022611 dormancy process BP
GO:0032446 protein modification by small protein conjugation BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032504 multicellular organism reproduction BP
GO:0033523 histone H2B ubiquitination BP
GO:0036211 protein modification process BP
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043170 macromolecule metabolic process BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045087 innate immune response BP
GO:0046983 protein dimerization activity MF
GO:0048316 seed development BP
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048608 reproductive structure development BP
GO:0048609 multicellular organismal reproductive process BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050832 defense response to fungus BP
GO:0050896 response to stimulus BP
GO:0051276 chromosome organization BP
GO:0051301 cell division BP
GO:0051302 regulation of cell division BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051726 regulation of cell cycle BP
GO:0051781 positive regulation of cell division BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0071695 anatomical structure maturation BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0098542 defense response to other organism BP
GO:0099402 plant organ development BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901987 regulation of cell cycle phase transition BP
GO:1901990 regulation of mitotic cell cycle phase transition BP
GO:1902749 regulation of cell cycle G2/M phase transition BP
GO:1905392 plant organ morphogenesis BP