Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G02G035282
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Position
chrG02:9901835-9906423 (-)
4588bp
Gene Type
gene
Gene Description (Protein Product)
cyclic nucleotide-gated ion channel
Organism
Populus alba x Populus glandulosa
Also AS Potri.002G170000AT1G01340Potri.002G170000.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G19G021865 Receptor protein kinase-like protein
Pop_G13G070962 LRR receptor-like serine threonine-protein kinase
Pop_G19G021872 Receptor protein kinase-like protein
Regulatory gene
Pop_A01G004498 Tesmin/TSO1-like CXC domain
Pop_A01G025061 B3 DNA binding domain
Pop_A01G029665 ETHYLENE INSENSITIVE 3-like 3

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005216 monoatomic ion channel activity MF
GO:0005244 voltage-gated monoatomic ion channel activity MF
GO:0005249 voltage-gated potassium channel activity MF
GO:0005261 monoatomic cation channel activity MF
GO:0005267 potassium channel activity MF
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0005887 plasma membrane CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0006813 potassium ion transport BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0008150 biological_process BP
GO:0008324 monoatomic cation transmembrane transporter activity MF
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009620 response to fungus BP
GO:0009987 cellular process BP
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015077 inorganic cation transmembrane transporter activity MF
GO:0015079 potassium ion transmembrane transporter activity MF
GO:0015267 channel activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0015672 inorganic cation transmembrane transport BP
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0022803 passive transmembrane transporter activity MF
GO:0022832 voltage-gated channel activity MF
GO:0022836 gated channel activity MF
GO:0022838 channel activity MF
GO:0022839 monoatomic ion gated channel activity MF
GO:0022843 voltage-gated monoatomic cation channel activity MF
GO:0022857 transmembrane transporter activity MF
GO:0022890 inorganic cation transmembrane transporter activity MF
GO:0030001 metal ion transport BP
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0034220 monoatomic ion transmembrane transport BP
GO:0042391 regulation of membrane potential BP
GO:0043207 response to external biotic stimulus BP
GO:0044425 obsolete membrane part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0046873 metal ion transmembrane transporter activity MF
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0055085 transmembrane transport BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071804 potassium ion transport BP
GO:0071805 potassium ion transmembrane transport BP
GO:0071944 cell periphery CC
GO:0098655 monoatomic cation transmembrane transport BP
GO:0098660 inorganic ion transmembrane transport BP
GO:0098662 inorganic cation transmembrane transport BP
KEGG Term Name Description
map04626 Plant-pathogen interaction Plants lack animal-like adaptive immunity mechanisms, and therefore have evolved a specific system with multiple layers against invading pathogens. The primary response includes the perception of pathogens by cell-surface pattern-recognition receptors (PRRs) and is referred to as PAMP-triggered immunity (PTI). Activation of FLS2 and EFR triggers MAPK signaling pathway that activates defense genes for antimictobial compounds. The increase in the cytosolic Ca2+ concentration is also a regulator for production of reactive oxygen species and localized programmed cell death/hypersensitive response. The secondary response is called effector-triggered immunity (ETI). Pathogens can acquire the ability to suppress PTI by directly injecting effector proteins into the plant cell through secretion systems. In addition, pathogens can manipulate plant hormone signaling pathways to evade host immune responses using coronatine toxin. Some plants possess specific intracellular surveillance proteins (R proteins) to monitor the presence of pathogen virulence proteins. This ETI occurs with localized programmed cell death to arrest pathogen growth, resulting in cultivar-specific disease resistance.