Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G03G076366
View in Genome Browser
Position
chrG03:1605752-1606528 (-)
776bp
Gene Type
gene
Gene Description (Protein Product)
Cytochrome c-type biogenesis protein
Organism
Populus alba x Populus glandulosa
Also AS Potri.003G205200AT3G51790Potri.003G205200.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G18G080303 Autophagy-related protein 11
Pop_G06G053969 Autophagy-related protein 11
Pop_G06G051682 LIMR family
Regulatory gene
Pop_A01G002215 NAC domain-containing protein
Pop_A01G003802 AP2-like ethylene-responsive transcription factor
Pop_A01G003924 Zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005740 mitochondrial envelope CC
GO:0005743 mitochondrial inner membrane CC
GO:0006464 protein modification process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009987 cellular process BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0017003 protein-heme linkage BP
GO:0017004 cytochrome complex assembly BP
GO:0017006 protein-tetrapyrrole linkage BP
GO:0018063 cytochrome c-heme linkage BP
GO:0019538 protein metabolic process BP
GO:0019866 organelle inner membrane CC
GO:0020037 heme binding MF
GO:0022607 cellular component assembly BP
GO:0031090 organelle membrane CC
GO:0031966 mitochondrial membrane CC
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0034622 protein-containing complex assembly BP
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046906 tetrapyrrole binding MF
GO:0048037 obsolete cofactor binding MF
GO:0065003 protein-containing complex assembly BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP