Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G04G010680
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Position
chrG04:407910-410836 (+)
2926bp
Gene Type
gene
Gene Description (Protein Product)
"Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall
Organism
Populus alba x Populus glandulosa
Also AS Potri.004G233900AT5G45280Potri.004G233900.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G15G074417 pre-mRNA-splicing factor SPF27 homolog
Pop_G14G044337 Brassinazole-resistant
Pop_G11G070390 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation
Regulatory gene
Pop_A01G005990 MADS-box transcription factor
Pop_A01G056931 Dof zinc finger protein
Pop_A01G059879 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0008150 biological_process BP
GO:0009505 plant-type cell wall CC
GO:0009506 plasmodesma CC
GO:0009987 cellular process BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016787 hydrolase activity MF
GO:0016788 hydrolase activity, acting on ester bonds MF
GO:0030054 cell junction CC
GO:0030312 external encapsulating structure CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045229 external encapsulating structure organization BP
GO:0052689 carboxylic ester hydrolase activity MF
GO:0052793 pectin acetylesterase activity MF
GO:0055044 symplast CC
GO:0071554 cell wall organization or biogenesis BP
GO:0071555 cell wall organization BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC