Basic Information
Gene ID
Pop_G04G066487
Position
chrG04:14498981-14501222 (-)
2241bp
Gene Type
gene
Gene Description (Protein Product)
40s ribosomal protein
Organism
Also AS Potri.004G073500AT4G25740Potri.004G073500.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G13G070871 Belongs to the eukaryotic ribosomal protein eS21 family
Pop_G05G069857 Belongs to the eukaryotic ribosomal protein eS21 family
Pop_G10G006118 Ribosomal S17
Regulatory gene
Pop_A01G002215 NAC domain-containing protein
Pop_A01G004084 NAC domain-containing protein
Pop_A01G004576 NAC domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0000028 ribosomal small subunit assembly BP
GO:0001763 morphogenesis of a branching structure BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003729 mRNA binding MF
GO:0003735 structural constituent of ribosome MF
GO:0005198 structural molecule activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0005840 ribosome CC
GO:0005844 polysome CC
GO:0006996 organelle organization BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009653 anatomical structure morphogenesis BP
GO:0009888 tissue development BP
GO:0009933 meristem structural organization BP
GO:0009987 cellular process BP
GO:0010014 meristem initiation BP
GO:0010016 shoot system morphogenesis BP
GO:0010223 secondary shoot formation BP
GO:0010252 auxin homeostasis BP
GO:0010346 shoot axis formation BP
GO:0015935 small ribosomal subunit CC
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0022603 regulation of anatomical structure morphogenesis BP
GO:0022607 cellular component assembly BP
GO:0022613 ribonucleoprotein complex biogenesis BP
GO:0022618 ribonucleoprotein complex assembly BP
GO:0022626 cytosolic ribosome CC
GO:0022627 cytosolic small ribosomal subunit CC
GO:0030312 external encapsulating structure CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032991 protein-containing complex CC
GO:0034622 protein-containing complex assembly BP
GO:0042254 ribosome biogenesis BP
GO:0042255 ribosome assembly BP
GO:0042274 ribosomal small subunit biogenesis BP
GO:0042592 homeostatic process BP
GO:0042788 polysomal ribosome CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044391 ribosomal subunit CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044445 obsolete cytosolic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048367 shoot system development BP
GO:0048507 meristem development BP
GO:0048532 anatomical structure arrangement BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048731 system development BP
GO:0048831 regulation of shoot system development BP
GO:0048856 anatomical structure development BP
GO:0048878 chemical homeostasis BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0060688 regulation of morphogenesis of a branching structure BP
GO:0065003 protein-containing complex assembly BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070925 organelle assembly BP
GO:0071826 ribonucleoprotein complex subunit organization BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0090506 axillary shoot meristem initiation BP
GO:0097159 organic cyclic compound binding MF
GO:1900618 regulation of shoot system morphogenesis BP
GO:1901363 heterocyclic compound binding MF
GO:1905393 plant organ formation BP
GO:1905428 regulation of plant organ formation BP
GO:1990904 ribonucleoprotein complex CC
GO:2000026 regulation of multicellular organismal development BP
GO:2000032 regulation of secondary shoot formation BP
KEGG Term Name Description
map03010 Ribosome -