PPGR - Gene Detail

Basic Information

Gene ID	Pop_G05G008242 View in Genome Browser
Position	chrG05:6245226-6250510 (-) 5284bp
Gene Type	gene
Gene Description (Protein Product)	Iaa-amino acid hydrolase
Organism	Populus alba x Populus glandulosa
Also AS	Potri.005G178900AT1G44350Potri.005G178900.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Pop_G11G070390 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation

Pop_G05G032902 cellular macromolecule catabolic process

Pop_G09G014101 Flowering-promoting factor 1-like

Regulatory gene

Pop_A01G056931 Dof zinc finger protein

Pop_A01G059879 Dof zinc finger protein

Pop_A02G012400 Dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0001101	response to acid chemical	BP
GO:0002682	regulation of immune system process	BP
GO:0002831	regulation of response to biotic stimulus	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0006082	organic acid metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009694	jasmonic acid metabolic process	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009753	response to jasmonic acid	BP
GO:0009987	cellular process	BP
GO:0010033	response to organic substance	BP
GO:0010112	regulation of systemic acquired resistance	BP
GO:0010817	regulation of hormone levels	BP
GO:0016787	hydrolase activity	MF
GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	MF
GO:0019752	carboxylic acid metabolic process	BP
GO:0031347	regulation of defense response	BP
GO:0032101	regulation of response to external stimulus	BP
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0042221	response to chemical	BP
GO:0042445	hormone metabolic process	BP
GO:0043436	oxoacid metabolic process	BP
GO:0043900	obsolete regulation of multi-organism process	BP
GO:0044237	cellular metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0045088	regulation of innate immune response	BP
GO:0048583	regulation of response to stimulus	BP
GO:0050776	regulation of immune response	BP
GO:0050789	regulation of biological process	BP
GO:0050896	response to stimulus	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0071704	organic substance metabolic process	BP
GO:0080134	regulation of response to stress	BP
GO:1901700	response to oxygen-containing compound	BP
GO:1990206	jasmonyl-Ile conjugate hydrolase activity	MF