Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G05G008761
View in Genome Browser
Position
chrG05:227702-230064 (+)
2362bp
Gene Type
gene
Gene Description (Protein Product)
Protein CUP-SHAPED COTYLEDON
Organism
Populus alba x Populus glandulosa
Also AS Potri.005G255900AT1G76420Potri.005G255900.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G11G077728 Protein CUP-SHAPED COTYLEDON 2-like
Pop_G13G070858 40S ribosomal protein
Pop_G10G060703 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Regulatory gene
Pop_A01G003924 Zinc finger protein
Pop_A01G004096 transcriptional regulator
Pop_A01G004199 GAGA binding protein-like family
Target gene
Pop_A01G000040 Reverse transcriptase (RNA-dependent DNA polymerase)
Pop_A01G002199 TruB family pseudouridylate synthase (N terminal domain)
Pop_A01G002200 quinone-oxidoreductase homolog, chloroplastic

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0006355 regulation of DNA-templated transcription BP
GO:0008150 biological_process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009888 tissue development BP
GO:0009889 regulation of biosynthetic process BP
GO:0009933 meristem structural organization BP
GO:0010014 meristem initiation BP
GO:0010199 organ boundary specification between lateral organs and the meristem BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032502 developmental process BP
GO:0048507 meristem development BP
GO:0048532 anatomical structure arrangement BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048856 anatomical structure development BP
GO:0048859 formation of anatomical boundary BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0080090 regulation of primary metabolic process BP
GO:0090691 formation of plant organ boundary BP
GO:0140110 transcription regulator activity MF
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP