PPGR - Gene Detail

Basic Information

Gene ID	Pop_G05G032821 View in Genome Browser
Position	chrG05:21325455-21329868 (+) 4413bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the peptidase A1 family
Organism	Populus alba x Populus glandulosa
Also AS	Potri.013G002200AT1G11910Potri.013G002200.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Pop_G11G070390 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation

Pop_G05G032902 cellular macromolecule catabolic process

Pop_UnG063052 Homeobox protein knotted-1-like

Regulatory gene

Pop_A01G003924 Zinc finger protein

Pop_A01G003996 GATA transcription factor

Pop_A01G004096 transcriptional regulator

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004175	endopeptidase activity	MF
GO:0004190	aspartic-type endopeptidase activity	MF
GO:0006508	proteolysis	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008233	peptidase activity	MF
GO:0009056	catabolic process	BP
GO:0009057	macromolecule catabolic process	BP
GO:0016787	hydrolase activity	MF
GO:0019538	protein metabolic process	BP
GO:0030163	protein catabolic process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0070001	aspartic-type peptidase activity	MF
GO:0070011	peptidase activity	MF
GO:0071704	organic substance metabolic process	BP
GO:0140096	catalytic activity, acting on a protein	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901565	organonitrogen compound catabolic process	BP
GO:1901575	organic substance catabolic process	BP