Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G05G057362
View in Genome Browser
Position
chrG05:2306490-2310389 (-)
3899bp
Gene Type
gene
Gene Description (Protein Product)
UPF0420 protein C16orf58 homolog
Organism
Populus alba x Populus glandulosa
Also AS Potri.005G224000AT2G31190Potri.005G224000.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G17G033166 ZINC FINGER protein
Pop_G17G025755 histone acetyltransferase
Pop_G14G088902 Regulator of chromosome condensation (RCC1) repeat
Regulatory gene
Pop_A01G004498 Tesmin/TSO1-like CXC domain
Pop_A01G025061 B3 DNA binding domain
Pop_A01G032239 B3 domain-containing transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0006810 transport BP
GO:0008150 biological_process BP
GO:0009314 response to radiation BP
GO:0009411 response to UV BP
GO:0009416 response to light stimulus BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009536 plastid CC
GO:0009628 response to abiotic stimulus BP
GO:0009914 hormone transport BP
GO:0009926 auxin polar transport BP
GO:0009941 chloroplast envelope CC
GO:0010224 response to UV-B BP
GO:0010817 regulation of hormone levels BP
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0060918 auxin transport BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP