PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Pop_G06G003461 View in Genome Browser
Position	chrG06:4472704-4483611 (-) 10907bp
Gene Type	gene
Gene Description (Protein Product)	3beta-hydroxysteroid-dehydrogenase decarboxylase isoform
Organism	Populus alba x Populus glandulosa
Also AS	Potri.006G218400AT2G26260Potri.006G218400.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Pop_G07G032521 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform Pop_G07G085300 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform Pop_G09G014047 Belongs to the sterol desaturase family
Regulatory gene	Pop_A01G003858 ethylene-responsive transcription factor Pop_A01G003924 Zinc finger protein Pop_A01G003933 DNA-binding domain in plant proteins such as APETALA2 and EREBPs

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0016020	membrane	CC
GO:0016491	oxidoreductase activity	MF
GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	MF
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	MF
GO:0047012	sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	MF
GO:0055114	obsolete oxidation-reduction process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00100	Steroid biosynthesis	-