PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Pop_G06G003467 View in Genome Browser
Position	chrG06:4424830-4429633 (+) 4803bp
Gene Type	gene
Gene Description (Protein Product)	Polyadenylate-binding protein-interacting protein
Organism	Populus alba x Populus glandulosa
Also AS	Potri.006G218900AT2G26280Potri.006G218900.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Pop_G09G077326 Binds the poly(A) tail of mRNA Pop_G14G044172 Binds the poly(A) tail of mRNA Pop_G14G089089 Chitin elicitor receptor kinase
Regulatory gene	Pop_A01G004206 Myb family transcription factor Pop_A01G010387 Myb family transcription factor APL Pop_A01G025061 B3 DNA binding domain

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003723	RNA binding	MF
GO:0003729	mRNA binding	MF
GO:0005488	binding	MF
GO:0097159	organic cyclic compound binding	MF
GO:1901363	heterocyclic compound binding	MF