Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G06G003584
View in Genome Browser
Position
chrG06:3492630-3497540 (-)
4910bp
Gene Type
gene
Gene Description (Protein Product)
homeobox protein
Organism
Populus alba x Populus glandulosa
Also AS Potri.006G230700AT4G32980Potri.006G230700.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G08G058373 Transcription factor bHLH49-like
Pop_G10G048134 Transcription factor bHLH49-like
Pop_G16G068832 DNA-binding domain
Regulatory gene
Pop_A01G003996 GATA transcription factor
Pop_A01G032331 Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters
Pop_A01G056931 Dof zinc finger protein
Target gene
Pop_A01G003852 CCAAT enhancer-binding protein
Pop_A01G003853 Required for the assembly and or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits
Pop_A01G003896 Allantoate

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008285 negative regulation of cell population proliferation BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009639 response to red or far red light BP
GO:0009640 photomorphogenesis BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009791 post-embryonic development BP
GO:0009838 abscission BP
GO:0009889 regulation of biosynthetic process BP
GO:0009908 flower development BP
GO:0010227 floral organ abscission BP
GO:0010228 vegetative to reproductive phase transition of meristem BP
GO:0010371 regulation of gibberellin biosynthetic process BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010565 regulation of cellular ketone metabolic process BP
GO:0010817 regulation of hormone levels BP
GO:0019216 regulation of lipid metabolic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019747 regulation of isoprenoid metabolic process BP
GO:0022414 reproductive process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032350 regulation of hormone metabolic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0042127 regulation of cell population proliferation BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043455 regulation of secondary metabolic process BP
GO:0043565 sequence-specific DNA binding MF
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046885 regulation of hormone biosynthetic process BP
GO:0046890 regulation of lipid biosynthetic process BP
GO:0048367 shoot system development BP
GO:0048437 floral organ development BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048608 reproductive structure development BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0048859 formation of anatomical boundary BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061458 reproductive system development BP
GO:0062012 regulation of small molecule metabolic process BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0080090 regulation of primary metabolic process BP
GO:0090470 shoot organ boundary specification BP
GO:0090567 reproductive shoot system development BP
GO:0090691 formation of plant organ boundary BP
GO:0097159 organic cyclic compound binding MF
GO:0099402 plant organ development BP
GO:0140110 transcription regulator activity MF
GO:1901363 heterocyclic compound binding MF
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP