Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G06G051580
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Position
chrG06:15748232-15751626 (-)
3394bp
Gene Type
gene
Gene Description (Protein Product)
Transcription elongation factor
Organism
Populus alba x Populus glandulosa
Also AS Potri.006G109300AT2G38560Potri.006G109300.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G08G058305 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
Pop_G17G087351 mediator of RNA polymerase II transcription subunit
Pop_G12G068422 RNA polymerase-associated protein
Regulatory gene
Pop_A01G003840 Basic leucine-zipper C terminal
Pop_A01G004012 Myb/SANT-like DNA-binding domain
Pop_A01G004175 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0001101 response to acid chemical BP
GO:0003006 developmental process involved in reproduction BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0006357 regulation of transcription by RNA polymerase II BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009739 response to gibberellin BP
GO:0009791 post-embryonic development BP
GO:0009845 seed germination BP
GO:0009889 regulation of biosynthetic process BP
GO:0009891 positive regulation of biosynthetic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009909 regulation of flower development BP
GO:0009910 negative regulation of flower development BP
GO:0010033 response to organic substance BP
GO:0010154 fruit development BP
GO:0010162 seed dormancy process BP
GO:0010431 seed maturation BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010557 positive regulation of macromolecule biosynthetic process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010628 positive regulation of gene expression BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0021700 developmental maturation BP
GO:0022414 reproductive process BP
GO:0022611 dormancy process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031328 positive regulation of cellular biosynthetic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032504 multicellular organism reproduction BP
GO:0032784 regulation of DNA-templated transcription elongation BP
GO:0033993 response to lipid BP
GO:0034243 regulation of transcription elongation by RNA polymerase II BP
GO:0042221 response to chemical BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0045893 positive regulation of DNA-templated transcription BP
GO:0045935 positive regulation of nucleobase-containing compound metabolic process BP
GO:0045944 positive regulation of transcription by RNA polymerase II BP
GO:0048316 seed development BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048580 regulation of post-embryonic development BP
GO:0048581 negative regulation of post-embryonic development BP
GO:0048608 reproductive structure development BP
GO:0048609 multicellular organismal reproductive process BP
GO:0048731 system development BP
GO:0048831 regulation of shoot system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051093 negative regulation of developmental process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051241 negative regulation of multicellular organismal process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051254 positive regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0071695 anatomical structure maturation BP
GO:0080090 regulation of primary metabolic process BP
GO:0090351 seedling development BP
GO:1901700 response to oxygen-containing compound BP
GO:1902680 positive regulation of RNA biosynthetic process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1903508 positive regulation of nucleic acid-templated transcription BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000241 regulation of reproductive process BP
GO:2000242 negative regulation of reproductive process BP
GO:2001141 regulation of RNA biosynthetic process BP