Basic Information
Gene ID
Pop_G06G082813
Position
chrG06:11728959-11733355 (-)
4396bp
Gene Type
gene
Gene Description (Protein Product)
Regulator of Vps4 activity in the MVB pathway
Organism
Also AS Potri.006G149800AT2G19710Potri.006G149800.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G08G058469 IST1 homolog
Pop_G08G057585 cytochrome c oxidase assembly protein
Pop_G10G007748 Cytochrome c oxidase assembly protein COX16
Regulatory gene
Pop_A01G003802 AP2-like ethylene-responsive transcription factor
Pop_A01G005990 MADS-box transcription factor
Pop_A01G025061 B3 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map04144 Endocytosis Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.