Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G06G089728
View in Genome Browser
Position
chrG06:21700195-21715577 (+)
15382bp
Gene Type
gene
Gene Description (Protein Product)
Ferredoxin-dependent glutamate synthase
Organism
Populus alba x Populus glandulosa
Also AS Potri.006G038400AT5G04140Potri.006G038400.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_UnG037343 Serine hydroxymethyltransferase
Pop_G10G006154 Serine hydroxymethyltransferase
Pop_G17G033341 glutamine synthetase
Regulatory gene
Pop_A01G004199 GAGA binding protein-like family
Pop_A01G054581 domain associated with HOX domains
Pop_A01G059720 Homeobox protein BEL1 homolog

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005759 mitochondrial matrix CC
GO:0006082 organic acid metabolic process BP
GO:0006520 amino acid metabolic process BP
GO:0006536 glutamate metabolic process BP
GO:0006537 glutamate biosynthetic process BP
GO:0006541 glutamine metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008652 amino acid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009064 glutamine family amino acid metabolic process BP
GO:0009084 glutamine family amino acid biosynthetic process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009628 response to abiotic stimulus BP
GO:0009743 response to carbohydrate BP
GO:0009744 response to sucrose BP
GO:0009853 photorespiration BP
GO:0009941 chloroplast envelope CC
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0015930 glutamate synthase activity MF
GO:0016020 membrane CC
GO:0016041 glutamate synthase (ferredoxin) activity MF
GO:0016053 organic acid biosynthetic process BP
GO:0016491 oxidoreductase activity MF
GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors MF
GO:0016643 oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor MF
GO:0019222 regulation of metabolic process BP
GO:0019676 ammonia assimilation cycle BP
GO:0019740 nitrogen utilization BP
GO:0019752 carboxylic acid metabolic process BP
GO:0019899 enzyme binding MF
GO:0031323 regulation of cellular metabolic process BP
GO:0031967 organelle envelope CC
GO:0031974 membrane-enclosed lumen CC
GO:0031975 envelope CC
GO:0034285 response to disaccharide BP
GO:0042221 response to chemical BP
GO:0043085 positive regulation of catalytic activity BP
GO:0043094 cellular metabolic compound salvage BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043436 oxoacid metabolic process BP
GO:0043648 dicarboxylic acid metabolic process BP
GO:0043650 dicarboxylic acid biosynthetic process BP
GO:0044093 positive regulation of molecular function BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046394 carboxylic acid biosynthetic process BP
GO:0048046 apoplast CC
GO:0050789 regulation of biological process BP
GO:0050790 regulation of catalytic activity BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051338 regulation of transferase activity BP
GO:0051347 positive regulation of transferase activity BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0070013 intracellular organelle lumen CC
GO:0071704 organic substance metabolic process BP
GO:0080114 positive regulation of glycine hydroxymethyltransferase activity BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901605 alpha-amino acid metabolic process BP
GO:1901607 alpha-amino acid biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
KEGG Term Name Description
map00910 Nitrogen metabolism -
map00630 Glyoxylate and dicarboxylate metabolism -