Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G08G057846
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Position
chrG08:16635930-16636850 (-)
920bp
Gene Type
gene
Gene Description (Protein Product)
Mur ligase middle domain
Organism
Populus alba x Populus glandulosa
Also AS Potri.008G060500AT4G38040Potri.008G060500.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G15G074693 Dihydrofolate synthetase
Pop_G16G016325 Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis
Pop_G08G058207 Folic acid synthesis protein
Regulatory gene
Pop_A01G004199 GAGA binding protein-like family
Pop_A01G056931 Dof zinc finger protein
Pop_A01G059879 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004326 tetrahydrofolylpolyglutamate synthase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006082 organic acid metabolic process BP
GO:0006575 cellular modified amino acid metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006732 obsolete coenzyme metabolic process BP
GO:0006760 folic acid-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009108 obsolete coenzyme biosynthetic process BP
GO:0009396 folic acid-containing compound biosynthetic process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009888 tissue development BP
GO:0009987 cellular process BP
GO:0010015 root morphogenesis BP
GO:0010053 root epidermal cell differentiation BP
GO:0010054 trichoblast differentiation BP
GO:0010449 root meristem growth BP
GO:0016049 cell growth BP
GO:0016053 organic acid biosynthetic process BP
GO:0016874 ligase activity MF
GO:0016879 ligase activity, forming carbon-nitrogen bonds MF
GO:0016881 acid-amino acid ligase activity MF
GO:0018130 heterocycle biosynthetic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0019752 carboxylic acid metabolic process BP
GO:0021700 developmental maturation BP
GO:0022622 root system development BP
GO:0030154 cell differentiation BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0035266 meristem growth BP
GO:0040007 growth BP
GO:0042398 cellular modified amino acid biosynthetic process BP
GO:0042558 pteridine-containing compound metabolic process BP
GO:0042559 pteridine-containing compound biosynthetic process BP
GO:0043436 oxoacid metabolic process BP
GO:0043603 amide metabolic process BP
GO:0043604 amide biosynthetic process BP
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046394 carboxylic acid biosynthetic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046900 tetrahydrofolylpolyglutamate metabolic process BP
GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process BP
GO:0048364 root development BP
GO:0048468 cell development BP
GO:0048469 cell maturation BP
GO:0048507 meristem development BP
GO:0048532 anatomical structure arrangement BP
GO:0048588 developmental cell growth BP
GO:0048589 developmental growth BP
GO:0048731 system development BP
GO:0048764 trichoblast maturation BP
GO:0048765 root hair cell differentiation BP
GO:0048767 root hair elongation BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0051186 obsolete cofactor metabolic process BP
GO:0051188 obsolete cofactor biosynthetic process BP
GO:0060560 developmental growth involved in morphogenesis BP
GO:0071695 anatomical structure maturation BP
GO:0071704 organic substance metabolic process BP
GO:0080147 root hair cell development BP
GO:0090558 plant epidermis development BP
GO:0090627 plant epidermal cell differentiation BP
GO:0099402 plant organ development BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1904961 quiescent center organization BP
GO:1905392 plant organ morphogenesis BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00790 Folate biosynthesis -