PPGR - Gene Detail

Gene ID	Pop_G08G058060 View in Genome Browser
Position	chrG08:18333197-18333912 (+) 715bp
Gene Type	gene
Gene Description (Protein Product)	Armadillo repeat-containing kinesin-like protein
Organism	Populus alba x Populus glandulosa
Also AS	Potri.010G227000AT1G01950Potri.010G227000.v4.1

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	Pop_G13G070835 Belongs to the 'GDSL' lipolytic enzyme family Pop_G14G044609 Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family Pop_UnG084505 BAR domain of APPL family
Regulatory gene	Pop_A01G002215 NAC domain-containing protein Pop_A01G003802 AP2-like ethylene-responsive transcription factor Pop_A01G004084 NAC domain-containing protein

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003774	cytoskeletal motor activity	MF
GO:0003777	microtubule motor activity	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005856	cytoskeleton	CC
GO:0005871	kinesin complex	CC
GO:0005875	microtubule associated complex	CC
GO:0006928	obsolete movement of cell or subcellular component	BP
GO:0007017	microtubule-based process	BP
GO:0007018	microtubule-based movement	BP
GO:0008150	biological_process	BP
GO:0009987	cellular process	BP
GO:0015630	microtubule cytoskeleton	CC
GO:0016462	pyrophosphatase activity	MF
GO:0016787	hydrolase activity	MF
GO:0016817	hydrolase activity, acting on acid anhydrides	MF
GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	MF
GO:0016887	ATP hydrolysis activity	MF
GO:0017111	ribonucleoside triphosphate phosphatase activity	MF
GO:0032991	protein-containing complex	CC
GO:0043226	organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044430	obsolete cytoskeletal part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC

KEGG Term	Name	Description
map04144	Endocytosis	Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.