Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G08G058245
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Position
chrG08:13954446-13960755 (+)
6309bp
Gene Type
gene
Gene Description (Protein Product)
Nuclear export mediator factor
Organism
Populus alba x Populus glandulosa
Also AS Potri.008G101200AT5G49930Potri.008G101200.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G19G084162 E3 ubiquitin-protein ligase
Pop_G10G064606 RIBOSOMAL protein
Pop_G11G070390 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation
Regulatory gene
Pop_A01G004199 GAGA binding protein-like family
Pop_A01G004559 Plant zinc cluster domain
Pop_A01G032208 WRKY transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0006810 transport BP
GO:0006913 nucleocytoplasmic transport BP
GO:0008150 biological_process BP
GO:0046907 intracellular transport BP
GO:0051168 nuclear export BP
GO:0051169 nuclear transport BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP