Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G08G082213
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Position
chrG08:6257755-6258780 (+)
1025bp
Gene Type
gene
Gene Description (Protein Product)
S-adenosylmethionine decarboxylase proenzyme
Organism
Populus alba x Populus glandulosa
Also AS Potri.008G198800AT5G18930Potri.008G198800.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G12G050725 Belongs to the spermidine spermine synthase family
Pop_UnG022361 Catalyzes the formation of S-adenosylmethionine from methionine and ATP
Pop_G14G051011 Catalyzes the formation of S-adenosylmethionine from methionine and ATP
Regulatory gene
Pop_A01G002215 NAC domain-containing protein
Pop_A01G003801 transcription factor
Pop_A01G004012 Myb/SANT-like DNA-binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004014 adenosylmethionine decarboxylase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006576 biogenic amine metabolic process BP
GO:0006595 polyamine metabolic process BP
GO:0006596 polyamine biosynthetic process BP
GO:0006597 spermine biosynthetic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008215 spermine metabolic process BP
GO:0008216 spermidine metabolic process BP
GO:0008295 spermidine biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009308 amine metabolic process BP
GO:0009309 amine biosynthetic process BP
GO:0009987 cellular process BP
GO:0016829 lyase activity MF
GO:0016830 carbon-carbon lyase activity MF
GO:0016831 carboxy-lyase activity MF
GO:0017144 xenobiotic metabolic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042401 biogenic amine biosynthetic process BP
GO:0044106 amine metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0071704 organic substance metabolic process BP
GO:0097164 ammonium ion metabolic process BP
GO:0099402 plant organ development BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00330 Arginine and proline metabolism -
map00270 Cysteine and methionine metabolism Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD:M00021]. In animals, methionine-derived homocysteine is used as sulfur source and its condensation product with serine (cystathionine) is converted to cysteine [MD:M00338]. Cysteine is metabolized to pyruvate in multiple routes. Methionine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, methionine is synthesized from aspartate [MD:M00017]. S-Adenosylmethionine (SAM), synthesized from methionine and ATP, is a methyl group donor in many important transfer reactions including DNA methylation for regulation of gene expression. SAM may also be used to regenerate methionine in the methionine salvage pathway [MD:M00034].