PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Pop_G08G083384 View in Genome Browser
Position	chrG08:3371347-3374074 (-) 2727bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the glycosyl hydrolase 28 family
Organism	Populus alba x Populus glandulosa
Also AS	Potri.008G211900AT1G23460Potri.008G211900.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Pop_G18G019154 galactokinase activity Pop_G18G086110 L-arabinokinase-like Pop_G18G078414 L-arabinokinase-like
Regulatory gene	Pop_A01G002215 NAC domain-containing protein Pop_A01G004084 NAC domain-containing protein Pop_A01G004576 NAC domain-containing protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005618	cell wall	CC
GO:0005623	obsolete cell	CC
GO:0009505	plant-type cell wall	CC
GO:0030312	external encapsulating structure	CC
GO:0044464	obsolete cell part	CC
GO:0071944	cell periphery	CC

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00040	Pentose and glucuronate interconversions	-