Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G09G022447
View in Genome Browser
Position
chrG09:830575-832334 (+)
1759bp
Gene Type
gene
Gene Description (Protein Product)
Structural maintenance of chromosomes protein
Organism
Populus alba x Populus glandulosa
Also AS Potri.009G155200AT2G27170Potri.009G155200.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G14G089104 cohesion protein
Pop_G17G037021 Sister chromatid cohesion 1 protein
Pop_G10G047260 Conserved region of Rad21 / Rec8 like protein
Regulatory gene
Pop_A01G003796 isoform X1
Pop_A01G003801 transcription factor
Pop_A01G003924 Zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000785 chromatin CC
GO:0000793 condensed chromosome CC
GO:0000819 sister chromatid segregation BP
GO:0003674 molecular_function MF
GO:0003682 chromatin binding MF
GO:0003824 catalytic activity MF
GO:0004672 protein kinase activity MF
GO:0004674 protein serine/threonine kinase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005694 chromosome CC
GO:0005737 cytoplasm CC
GO:0005819 spindle CC
GO:0005856 cytoskeleton CC
GO:0005911 cell-cell junction CC
GO:0006464 protein modification process BP
GO:0006468 protein phosphorylation BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006996 organelle organization BP
GO:0007049 cell cycle BP
GO:0007059 chromosome segregation BP
GO:0007062 sister chromatid cohesion BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008278 cohesin complex CC
GO:0009506 plasmodesma CC
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009987 cellular process BP
GO:0010468 regulation of gene expression BP
GO:0015630 microtubule cytoskeleton CC
GO:0016043 cellular component organization BP
GO:0016301 kinase activity MF
GO:0016310 phosphorylation BP
GO:0016363 nuclear matrix CC
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016773 phosphotransferase activity, alcohol group as acceptor MF
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0022402 cell cycle process BP
GO:0030054 cell junction CC
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032991 protein-containing complex CC
GO:0034399 nuclear periphery CC
GO:0036211 protein modification process BP
GO:0042802 identical protein binding MF
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044428 obsolete nuclear part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051276 chromosome organization BP
GO:0055044 symplast CC
GO:0060147 regulation of post-transcriptional gene silencing BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060966 regulation of gene silencing by RNA BP
GO:0060968 obsolete regulation of gene silencing BP
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0098813 nuclear chromosome segregation BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1900368 regulation of post-transcriptional gene silencing by RNA BP
GO:1901564 organonitrogen compound metabolic process BP