PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Pop_G10G027057 View in Genome Browser
Position	chrG10:14815775-14818811 (-) 3036bp
Gene Type	gene
Gene Description (Protein Product)	L-tryptophan--pyruvate aminotransferase 1-like
Organism	Populus alba x Populus glandulosa
Also AS	Potri.010G044500AT1G70560Potri.010G044500.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Pop_G18G078551 monooxygenase Pop_G11G070407 tryptophan synthase Pop_G12G068350 Tryptophan aminotransferase-related protein
Regulatory gene	Pop_A01G003802 AP2-like ethylene-responsive transcription factor Pop_A01G004498 Tesmin/TSO1-like CXC domain Pop_A01G005990 MADS-box transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0003006	developmental process involved in reproduction	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004021	L-alanine:2-oxoglutarate aminotransferase activity	MF
GO:0004838	L-tyrosine:2-oxoglutarate aminotransferase activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006082	organic acid metabolic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006810	transport	BP
GO:0006950	response to stress	BP
GO:0006952	defense response	BP
GO:0007275	multicellular organism development	BP
GO:0008144	obsolete drug binding	MF
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008483	transaminase activity	MF
GO:0008793	aromatic-amino-acid:2-oxoglutarate aminotransferase activity	MF
GO:0009058	biosynthetic process	BP
GO:0009314	response to radiation	BP
GO:0009416	response to light stimulus	BP
GO:0009605	response to external stimulus	BP
GO:0009606	tropism	BP
GO:0009607	response to biotic stimulus	BP
GO:0009617	response to bacterium	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009629	response to gravity	BP
GO:0009630	gravitropism	BP
GO:0009639	response to red or far red light	BP
GO:0009641	shade avoidance	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009683	indoleacetic acid metabolic process	BP
GO:0009684	indoleacetic acid biosynthetic process	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009723	response to ethylene	BP
GO:0009725	response to hormone	BP
GO:0009791	post-embryonic development	BP
GO:0009850	auxin metabolic process	BP
GO:0009851	auxin biosynthetic process	BP
GO:0009888	tissue development	BP
GO:0009908	flower development	BP
GO:0009914	hormone transport	BP
GO:0009926	auxin polar transport	BP
GO:0009958	positive gravitropism	BP
GO:0009987	cellular process	BP
GO:0010015	root morphogenesis	BP
GO:0010033	response to organic substance	BP
GO:0010073	meristem maintenance	BP
GO:0010074	maintenance of meristem identity	BP
GO:0010078	maintenance of root meristem identity	BP
GO:0010087	phloem or xylem histogenesis	BP
GO:0010326	methionine-oxo-acid transaminase activity	MF
GO:0010817	regulation of hormone levels	BP
GO:0016053	organic acid biosynthetic process	BP
GO:0016740	transferase activity	MF
GO:0016769	transferase activity, transferring nitrogenous groups	MF
GO:0018130	heterocycle biosynthetic process	BP
GO:0019438	aromatic compound biosynthetic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0019827	stem cell population maintenance	BP
GO:0019842	vitamin binding	MF
GO:0022414	reproductive process	BP
GO:0022622	root system development	BP
GO:0030170	pyridoxal phosphate binding	MF
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034754	hormone metabolic process	BP
GO:0036094	small molecule binding	MF
GO:0042221	response to chemical	BP
GO:0042430	indole-containing compound metabolic process	BP
GO:0042435	indole-containing compound biosynthetic process	BP
GO:0042445	hormone metabolic process	BP
GO:0042446	hormone biosynthetic process	BP
GO:0042742	defense response to bacterium	BP
GO:0043167	ion binding	MF
GO:0043168	anion binding	MF
GO:0043207	response to external biotic stimulus	BP
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0046394	carboxylic acid biosynthetic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0047312	L-phenylalanine:pyruvate aminotransferase activity	MF
GO:0047635	alanine-oxo-acid transaminase activity	MF
GO:0048037	obsolete cofactor binding	MF
GO:0048364	root development	BP
GO:0048366	leaf development	BP
GO:0048367	shoot system development	BP
GO:0048438	floral whorl development	BP
GO:0048467	gynoecium development	BP
GO:0048507	meristem development	BP
GO:0048608	reproductive structure development	BP
GO:0048731	system development	BP
GO:0048827	phyllome development	BP
GO:0048856	anatomical structure development	BP
GO:0050048	L-leucine:2-oxoglutarate aminotransferase activity	MF
GO:0050362	L-tryptophan:2-oxoglutarate aminotransferase activity	MF
GO:0050662	obsolete coenzyme binding	MF
GO:0050896	response to stimulus	BP
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0051704	obsolete multi-organism process	BP
GO:0051707	response to other organism	BP
GO:0060918	auxin transport	BP
GO:0061458	reproductive system development	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0070279	vitamin B6 binding	MF
GO:0070529	L-tryptophan aminotransferase activity	MF
GO:0070546	L-phenylalanine aminotransferase activity	MF
GO:0070547	L-tyrosine aminotransferase activity	MF
GO:0070548	L-glutamine aminotransferase activity	MF
GO:0071704	organic substance metabolic process	BP
GO:0072330	monocarboxylic acid biosynthetic process	BP
GO:0080097	L-tryptophan:pyruvate aminotransferase activity	MF
GO:0080098	L-tyrosine:pyruvate aminotransferase activity	MF
GO:0080099	L-methionine:2-oxoglutarate aminotransferase activity	MF
GO:0080100	L-glutamine:2-oxoglutarate aminotransferase activity	MF
GO:0080130	L-phenylalanine:2-oxoglutarate aminotransferase activity	MF
GO:0090567	reproductive shoot system development	BP
GO:0097159	organic cyclic compound binding	MF
GO:0098542	defense response to other organism	BP
GO:0098727	maintenance of cell number	BP
GO:0099402	plant organ development	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901363	heterocyclic compound binding	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1905392	plant organ morphogenesis	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00380	Tryptophan metabolism	-