PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Pop_G10G048059 View in Genome Browser
Position	chrG10:7113163-7113928 (+) 765bp
Gene Type	gene
Gene Description (Protein Product)	seed maturation protein
Organism	Populus alba x Populus glandulosa
Also AS	Potri.008G106600AT3G16990Potri.008G106600.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Pop_UnG071200 Belongs to the protein kinase superfamily. Ser Thr protein kinase family Pop_G19G009350 Belongs to the protein kinase superfamily. Ser Thr protein kinase family Pop_G13G082503 Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Regulatory gene	Pop_A01G056931 Dof zinc finger protein Pop_A01G059879 Dof zinc finger protein Pop_A02G012400 Dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00730	Thiamine metabolism	-