Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G10G048157
View in Genome Browser
Position
chrG10:7692081-7692933 (+)
852bp
Gene Type
gene
Gene Description (Protein Product)
) transport protein 1-like
Organism
Populus alba x Populus glandulosa
Also AS Potri.010G134300AT1G31260Potri.010G134300.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G11G070390 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation
Pop_G11G070198 LSD1 zinc finger
Pop_G17G025734 protein domain specific binding
Regulatory gene
Pop_A01G003796 isoform X1
Pop_A01G003840 Basic leucine-zipper C terminal
Pop_A01G003952 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000041 transition metal ion transport BP
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005385 zinc ion transmembrane transporter activity MF
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0006826 iron ion transport BP
GO:0006829 zinc ion transport BP
GO:0008150 biological_process BP
GO:0008324 monoatomic cation transmembrane transporter activity MF
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0015691 cadmium ion transport BP
GO:0016020 membrane CC
GO:0022857 transmembrane transporter activity MF
GO:0022890 inorganic cation transmembrane transporter activity MF
GO:0030001 metal ion transport BP
GO:0034220 monoatomic ion transmembrane transport BP
GO:0044464 obsolete cell part CC
GO:0046873 metal ion transmembrane transporter activity MF
GO:0046915 transition metal ion transmembrane transporter activity MF
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0055085 transmembrane transport BP
GO:0070838 metal ion transport BP
GO:0071577 zinc ion transmembrane transport BP
GO:0071944 cell periphery CC
GO:0072509 inorganic cation transmembrane transporter activity MF
GO:0072511 inorganic cation transmembrane transport BP
GO:0098655 monoatomic cation transmembrane transport BP
GO:0098660 inorganic ion transmembrane transport BP
GO:0098662 inorganic cation transmembrane transport BP