PPGR - Gene Detail

Basic Information

Gene ID	Pop_G11G070211 View in Genome Browser
Position	chrG11:1070393-1074017 (-) 3624bp
Gene Type	gene
Gene Description (Protein Product)	"The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles
Organism	Populus alba x Populus glandulosa
Also AS	Potri.011G155800AT1G30630Potri.011G155800.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Pop_G15G048784 The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network

Pop_G12G068246 The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network

Pop_G18G078461 The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins

Regulatory gene

Pop_A01G005990 MADS-box transcription factor

Pop_A01G056931 Dof zinc finger protein

Pop_A01G059879 Dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005773	vacuole	CC
GO:0005774	vacuolar membrane	CC
GO:0005794	Golgi apparatus	CC
GO:0005798	Golgi-associated vesicle	CC
GO:0005829	cytosol	CC
GO:0006810	transport	BP
GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	BP
GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	BP
GO:0006891	intra-Golgi vesicle-mediated transport	BP
GO:0008150	biological_process	BP
GO:0012505	endomembrane system	CC
GO:0012506	vesicle membrane	CC
GO:0016020	membrane	CC
GO:0016192	vesicle-mediated transport	BP
GO:0030117	membrane coat	CC
GO:0030120	vesicle coat	CC
GO:0030126	COPI vesicle coat	CC
GO:0030135	coated vesicle	CC
GO:0030137	COPI-coated vesicle	CC
GO:0030659	cytoplasmic vesicle membrane	CC
GO:0030660	Golgi-associated vesicle membrane	CC
GO:0030662	coated vesicle membrane	CC
GO:0030663	COPI-coated vesicle membrane	CC
GO:0031090	organelle membrane	CC
GO:0031410	cytoplasmic vesicle	CC
GO:0031982	vesicle	CC
GO:0032991	protein-containing complex	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044431	obsolete Golgi apparatus part	CC
GO:0044433	obsolete cytoplasmic vesicle part	CC
GO:0044437	obsolete vacuolar part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0046907	intracellular transport	BP
GO:0048193	Golgi vesicle transport	BP
GO:0048475	coated membrane	CC
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0051641	cellular localization	BP
GO:0051649	establishment of localization in cell	BP
GO:0097708	intracellular vesicle	CC
GO:0098588	bounding membrane of organelle	CC
GO:0098796	membrane protein complex	CC
GO:0098805	membrane	CC