PPGR - Gene Detail

Gene ID	Pop_G12G008815 View in Genome Browser
Position	chrG12:2803241-2803819 (-) 578bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Organism	Populus alba x Populus glandulosa
Also AS	Potri.015G101100AT3G48730Potri.015G101100.v4.1

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	Pop_G17G025734 protein domain specific binding Pop_G16G025159 Magnesium-protoporphyrin IX monomethyl ester oxidative cyclase Pop_G18G083255 chlorophyll(ide) b reductase NYC1
Regulatory gene	Pop_A01G003924 Zinc finger protein Pop_A01G003996 GATA transcription factor Pop_A01G004096 transcriptional regulator

Load All Networks

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005576	extracellular region	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0009507	chloroplast	CC
GO:0009526	plastid envelope	CC
GO:0009532	plastid stroma	CC
GO:0009536	plastid	CC
GO:0009570	chloroplast stroma	CC
GO:0009941	chloroplast envelope	CC
GO:0031967	organelle envelope	CC
GO:0031975	envelope	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0048046	apoplast	CC

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00860	Porphyrin and chlorophyll metabolism	-