PPGR - Gene Detail

Basic Information

Gene ID	Pop_G12G008921 View in Genome Browser
Position	chrG12:3406469-3407533 (+) 1064bp
Gene Type	gene
Gene Description (Protein Product)	Mediates the uptake of pyruvate into mitochondria
Organism	Populus alba x Populus glandulosa
Also AS	Potri.012G095133AT5G20090Potri.012G095133.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Pop_G18G080101 Small nuclear ribonucleoprotein

Pop_G19G007583 Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone

Pop_G15G035005 Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA

Regulatory gene

Pop_A01G025061 B3 DNA binding domain

Pop_A01G032239 B3 domain-containing transcription factor

Pop_A01G056931 Dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005215	transporter activity	MF
GO:0005342	organic acid transmembrane transporter activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0005740	mitochondrial envelope	CC
GO:0005743	mitochondrial inner membrane	CC
GO:0005773	vacuole	CC
GO:0005774	vacuolar membrane	CC
GO:0005886	plasma membrane	CC
GO:0006810	transport	BP
GO:0006811	monoatomic ion transport	BP
GO:0006820	monoatomic anion transport	BP
GO:0006839	mitochondrial transport	BP
GO:0006848	pyruvate transport	BP
GO:0006850	mitochondrial pyruvate transmembrane transport	BP
GO:0008028	monocarboxylic acid transmembrane transporter activity	MF
GO:0008150	biological_process	BP
GO:0008509	monoatomic anion transmembrane transporter activity	MF
GO:0008514	organic anion transmembrane transporter activity	MF
GO:0010119	regulation of stomatal movement	BP
GO:0015075	monoatomic ion transmembrane transporter activity	MF
GO:0015318	inorganic molecular entity transmembrane transporter activity	MF
GO:0015711	organic anion transport	BP
GO:0015718	monocarboxylic acid transport	BP
GO:0015849	organic acid transport	BP
GO:0016020	membrane	CC
GO:0016021	membrane	CC
GO:0019866	organelle inner membrane	CC
GO:0022857	transmembrane transporter activity	MF
GO:0031090	organelle membrane	CC
GO:0031224	obsolete intrinsic component of membrane	CC
GO:0031300	obsolete intrinsic component of organelle membrane	CC
GO:0031301	obsolete integral component of organelle membrane	CC
GO:0031304	obsolete intrinsic component of mitochondrial inner membrane	CC
GO:0031305	obsolete integral component of mitochondrial inner membrane	CC
GO:0031966	mitochondrial membrane	CC
GO:0031967	organelle envelope	CC
GO:0031975	envelope	CC
GO:0032592	obsolete integral component of mitochondrial membrane	CC
GO:0034220	monoatomic ion transmembrane transport	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044429	obsolete mitochondrial part	CC
GO:0044437	obsolete vacuolar part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044455	obsolete mitochondrial membrane part	CC
GO:0044464	obsolete cell part	CC
GO:0046942	carboxylic acid transport	BP
GO:0046943	carboxylic acid transmembrane transporter activity	MF
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050833	pyruvate transmembrane transporter activity	MF
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0055085	transmembrane transport	BP
GO:0065007	biological regulation	BP
GO:0071702	organic substance transport	BP
GO:0071944	cell periphery	CC
GO:0098573	obsolete intrinsic component of mitochondrial membrane	CC
GO:0098588	bounding membrane of organelle	CC
GO:0098656	monoatomic anion transmembrane transport	BP
GO:0098805	membrane	CC
GO:1901475	pyruvate transmembrane transport	BP
GO:1903825	organic acid transmembrane transport	BP
GO:1905039	carboxylic acid transmembrane transport	BP
GO:1990542	mitochondrial transmembrane transport	BP