Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G12G076208
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Position
chrG12:12646212-12647234 (-)
1022bp
Gene Type
gene
Gene Description (Protein Product)
Protein TRANSPARENT TESTA GLABRA
Organism
Populus alba x Populus glandulosa
Also AS Potri.012G006100AT5G24520Potri.012G006100.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G13G071328 assists the folding of proteins upon ATP hydrolysis
Pop_G19G009245 assists the folding of proteins upon ATP hydrolysis
Pop_G15G074414 Guanine nucleotide-binding protein subunit beta-like
Regulatory gene
Pop_A01G003858 ethylene-responsive transcription factor
Pop_A01G003933 DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Pop_A01G003963 ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0001708 cell fate specification BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0008150 biological_process BP
GO:0008544 epidermis development BP
GO:0009719 response to endogenous stimulus BP
GO:0009723 response to ethylene BP
GO:0009725 response to hormone BP
GO:0009733 response to auxin BP
GO:0009888 tissue development BP
GO:0009913 epidermal cell differentiation BP
GO:0009957 epidermal cell fate specification BP
GO:0009987 cellular process BP
GO:0010026 trichome differentiation BP
GO:0010033 response to organic substance BP
GO:0030154 cell differentiation BP
GO:0030855 epithelial cell differentiation BP
GO:0032502 developmental process BP
GO:0032879 regulation of localization BP
GO:0032880 regulation of protein localization BP
GO:0042221 response to chemical BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0045165 cell fate commitment BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050896 response to stimulus BP
GO:0060429 epithelium development BP
GO:0065007 biological regulation BP
GO:0090558 plant epidermis development BP
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF