Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G13G071429
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Position
chrG13:7583919-7588746 (-)
4827bp
Gene Type
gene
Gene Description (Protein Product)
TOM1-like protein
Organism
Populus alba x Populus glandulosa
Also AS Potri.013G082500AT5G16880Potri.013G082500.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G17G072827 E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates
Pop_G14G051001 Belongs to the protein kinase superfamily
Pop_UnG054083 Belongs to the protein kinase superfamily
Regulatory gene
Pop_A01G003802 AP2-like ethylene-responsive transcription factor
Pop_A01G005990 MADS-box transcription factor
Pop_A01G029538 AP2-like ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0005886 plasma membrane CC
GO:0007088 regulation of mitotic nuclear division BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007346 regulation of mitotic cell cycle BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0010564 regulation of cell cycle process BP
GO:0010639 negative regulation of organelle organization BP
GO:0010948 negative regulation of cell cycle process BP
GO:0016020 membrane CC
GO:0019899 enzyme binding MF
GO:0019900 kinase binding MF
GO:0019901 protein kinase binding MF
GO:0023052 signaling BP
GO:0030276 clathrin binding MF
GO:0033043 regulation of organelle organization BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045786 negative regulation of cell cycle BP
GO:0045839 negative regulation of mitotic nuclear division BP
GO:0045930 negative regulation of mitotic cell cycle BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051128 regulation of cellular component organization BP
GO:0051129 negative regulation of cellular component organization BP
GO:0051716 cellular response to stimulus BP
GO:0051726 regulation of cell cycle BP
GO:0051783 regulation of nuclear division BP
GO:0051784 negative regulation of nuclear division BP
GO:0065007 biological regulation BP
GO:0071944 cell periphery CC