Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G13G071577
View in Genome Browser
Position
chrG13:8322833-8331522 (-)
8689bp
Gene Type
gene
Gene Description (Protein Product)
DNA-binding protein
Organism
Populus alba x Populus glandulosa
Also AS Potri.013G073900AT5G35970Potri.013G073900.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G19G009429 Cyclic dof factor
Pop_G17G067047 Cyclic dof factor
Pop_G14G000583 ATP-dependent zinc metalloprotease FTSH 2
Regulatory gene
Pop_A01G005990 MADS-box transcription factor
Pop_A01G025061 B3 DNA binding domain
Pop_A01G032239 B3 domain-containing transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000049 tRNA binding MF
GO:0000166 nucleotide binding MF
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003678 DNA helicase activity MF
GO:0003723 RNA binding MF
GO:0003724 RNA helicase activity MF
GO:0003824 catalytic activity MF
GO:0004003 DNA helicase activity MF
GO:0004004 RNA helicase activity MF
GO:0004386 helicase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005524 ATP binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0006996 organelle organization BP
GO:0008026 helicase activity MF
GO:0008094 ATP-dependent activity, acting on DNA MF
GO:0008144 obsolete drug binding MF
GO:0008150 biological_process BP
GO:0008186 ATP-dependent activity, acting on RNA MF
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016887 ATP hydrolysis activity MF
GO:0017076 purine nucleotide binding MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0030554 adenyl nucleotide binding MF
GO:0032392 DNA geometric change BP
GO:0032508 DNA duplex unwinding BP
GO:0032553 ribonucleotide binding MF
GO:0032555 purine ribonucleotide binding MF
GO:0032559 adenyl ribonucleotide binding MF
GO:0032574 5'-3' RNA helicase activity MF
GO:0032575 5'-3' RNA helicase activity MF
GO:0035639 purine ribonucleoside triphosphate binding MF
GO:0036094 small molecule binding MF
GO:0042623 ATP hydrolysis activity MF
GO:0043021 ribonucleoprotein complex binding MF
GO:0043022 ribosome binding MF
GO:0043139 5'-3' DNA helicase activity MF
GO:0043141 5'-3' DNA helicase activity MF
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043621 protein self-association MF
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0044877 protein-containing complex binding MF
GO:0051276 chromosome organization BP
GO:0070035 obsolete purine NTP-dependent helicase activity MF
GO:0071103 DNA conformation change BP
GO:0071840 cellular component organization or biogenesis BP
GO:0097159 organic cyclic compound binding MF
GO:0097367 carbohydrate derivative binding MF
GO:0140097 catalytic activity, acting on DNA MF
GO:0140098 catalytic activity, acting on RNA MF
GO:1901265 nucleoside phosphate binding MF
GO:1901363 heterocyclic compound binding MF