Basic Information
Gene ID
Pop_G13G072466
Position
chrG13:673502-678763 (+)
5261bp
Gene Type
gene
Gene Description (Protein Product)
Cell division control protein 48 homolog C-like
Organism
Also AS Potri.013G151600AT3G01610Potri.013G151600.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_UnG084952 Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits
Pop_UnG084951 Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits
Pop_G15G084392 rRNA-processing protein EBP2 homolog
Regulatory gene
Pop_A01G003924 Zinc finger protein
Pop_A01G003954 Homeobox-leucine zipper protein
Pop_A01G004096 transcriptional regulator

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map03008 Ribosome biogenesis in eukaryotes Ribosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It requires hundreds of factors not present in the mature particle. In the absence of these proteins, ribosome biogenesis is stalled and cell growth is terminated even under optimal growth conditions. The primary pre-rRNA transcript is assembled into the 90S pre-ribosome, which contains both 40S and 60S assembly factors. Within this complex, the pre-rRNA is cleaved. pre-60S ribosomes are subjected to several sequential processing steps in the nucleoplasm involving numerous assembly intermediates before it is exported to the cytoplasm and matured into the 60S ribosomal subunit. The pre-40S ribosome is matured to the small ribosomal subunit in the cytoplasm by cleavage.