PPGR - Gene Detail

Gene ID	Pop_G13G072693 View in Genome Browser
Position	chrG13:326853-329112 (+) 2259bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
Organism	Populus alba x Populus glandulosa
Also AS	Potri.013G156500AT5G05340Potri.013G156500.v4.1

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)

Pop_G15G015148 Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Pop_G14G051185 Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Pop_G14G051184 Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Regulatory gene

Pop_A01G002215 NAC domain-containing protein

Pop_A01G003802 AP2-like ethylene-responsive transcription factor

Pop_A01G004084 NAC domain-containing protein

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00940	Phenylpropanoid biosynthesis	Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.