Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G14G000549
View in Genome Browser
Position
chrG14:7075147-7084970 (+)
9823bp
Gene Type
gene
Gene Description (Protein Product)
"Phytoene dehydrogenase
Organism
Populus alba x Populus glandulosa
Also AS Potri.014G148700AT4G14210Potri.014G148700.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G17G033316 Phytoene synthase
Pop_G15G048848 1-deoxy-D-xylulose 5-phosphate reductoisomerase
Pop_G16G016166 Magnesium-chelatase subunit ChlH
Regulatory gene
Pop_A01G003801 transcription factor
Pop_A01G004012 Myb/SANT-like DNA-binding domain
Pop_A01G004132 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006629 lipid metabolic process BP
GO:0006720 isoprenoid metabolic process BP
GO:0006721 terpenoid metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008299 isoprenoid biosynthetic process BP
GO:0008610 lipid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009534 chloroplast thylakoid CC
GO:0009536 plastid CC
GO:0009579 thylakoid CC
GO:0009941 chloroplast envelope CC
GO:0009987 cellular process BP
GO:0016108 tetraterpenoid metabolic process BP
GO:0016109 tetraterpenoid biosynthetic process BP
GO:0016114 terpenoid biosynthetic process BP
GO:0016116 carotenoid metabolic process BP
GO:0016117 carotenoid biosynthetic process BP
GO:0016166 phytoene dehydrogenase activity MF
GO:0016491 oxidoreductase activity MF
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors MF
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0031976 plastid thylakoid CC
GO:0031984 organelle subcompartment CC
GO:0042440 pigment metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046148 pigment biosynthetic process BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0071704 organic substance metabolic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00906 Carotenoid biosynthesis -