Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G14G078037
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Position
chrG14:11533984-11537794 (+)
3810bp
Gene Type
gene
Gene Description (Protein Product)
"Catalyzes the reversible reaction in which hydroxymethyl group from 5
Organism
Populus alba x Populus glandulosa
Also AS Potri.014G090500AT2G46110Potri.014G090500.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G14G089106 Small ubiquitin-related modifier
Pop_G14G083027 Small ubiquitin-related modifier
Pop_G19G009554 Ketol-acid reductoisomerase
Regulatory gene
Pop_A01G004498 Tesmin/TSO1-like CXC domain
Pop_A01G032290 tesmin TSO1-like CXC
Pop_A05G071818 Protein tesmin TSO1-like CXC

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0006082 organic acid metabolic process BP
GO:0006575 cellular modified amino acid metabolic process BP
GO:0006732 obsolete coenzyme metabolic process BP
GO:0006766 vitamin metabolic process BP
GO:0006767 water-soluble vitamin metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008270 zinc ion binding MF
GO:0009058 biosynthetic process BP
GO:0009108 obsolete coenzyme biosynthetic process BP
GO:0009110 vitamin biosynthetic process BP
GO:0009987 cellular process BP
GO:0015939 pantothenate metabolic process BP
GO:0015940 pantothenate biosynthetic process BP
GO:0016053 organic acid biosynthetic process BP
GO:0016740 transferase activity MF
GO:0016741 transferase activity, transferring one-carbon groups MF
GO:0016742 hydroxymethyl-, formyl- and related transferase activity MF
GO:0019752 carboxylic acid metabolic process BP
GO:0032787 monocarboxylic acid metabolic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042364 water-soluble vitamin biosynthetic process BP
GO:0042398 cellular modified amino acid biosynthetic process BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043436 oxoacid metabolic process BP
GO:0043603 amide metabolic process BP
GO:0043604 amide biosynthetic process BP
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046394 carboxylic acid biosynthetic process BP
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0050897 cobalt ion binding MF
GO:0051186 obsolete cofactor metabolic process BP
GO:0051188 obsolete cofactor biosynthetic process BP
GO:0071704 organic substance metabolic process BP
GO:0072330 monocarboxylic acid biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00770 Pantothenate and CoA biosynthesis -