Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G14G088832
View in Genome Browser
Position
chrG14:5381198-5386342 (+)
5144bp
Gene Type
gene
Gene Description (Protein Product)
Vacuolar protein-sorting-associated protein 11 homolog
Organism
Populus alba x Populus glandulosa
Also AS Potri.014G165400AT2G05170Potri.014G165400.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G18G078665 Belongs to the synaptobrevin family
Pop_G16G025178 Vacuolar protein sorting-associated protein 53
Pop_G18G078516 TIFY 8-like
Regulatory gene
Pop_A01G003796 isoform X1
Pop_A01G003924 Zinc finger protein
Pop_A01G003952 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000149 SNARE binding MF
GO:0000323 lytic vacuole CC
GO:0000325 plant-type vacuole CC
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005764 lysosome CC
GO:0005768 endosome CC
GO:0005769 early endosome CC
GO:0005770 late endosome CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005856 cytoskeleton CC
GO:0005884 actin filament CC
GO:0006810 transport BP
GO:0006887 exocytosis BP
GO:0006904 vesicle docking involved in exocytosis BP
GO:0006906 vesicle fusion BP
GO:0006996 organelle organization BP
GO:0007032 endosome organization BP
GO:0007033 vacuole organization BP
GO:0007034 vacuolar transport BP
GO:0007040 lysosome organization BP
GO:0007041 lysosomal transport BP
GO:0008150 biological_process BP
GO:0008333 endosome to lysosome transport BP
GO:0009705 plant-type vacuole membrane CC
GO:0009893 positive regulation of metabolic process BP
GO:0009894 regulation of catabolic process BP
GO:0009896 positive regulation of catabolic process BP
GO:0009987 cellular process BP
GO:0010256 endomembrane system organization BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0012505 endomembrane system CC
GO:0015629 actin cytoskeleton CC
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016192 vesicle-mediated transport BP
GO:0019222 regulation of metabolic process BP
GO:0019904 protein domain specific binding MF
GO:0019905 syntaxin binding MF
GO:0022406 membrane docking BP
GO:0030139 endocytic vesicle CC
GO:0030674 protein-macromolecule adaptor activity MF
GO:0030897 HOPS complex CC
GO:0031090 organelle membrane CC
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031329 regulation of cellular catabolic process BP
GO:0031331 positive regulation of cellular catabolic process BP
GO:0031338 regulation of vesicle fusion BP
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0032268 regulation of protein metabolic process BP
GO:0032270 positive regulation of protein metabolic process BP
GO:0032386 regulation of intracellular transport BP
GO:0032388 positive regulation of intracellular transport BP
GO:0032879 regulation of localization BP
GO:0032940 secretion by cell BP
GO:0032991 protein-containing complex CC
GO:0033043 regulation of organelle organization BP
GO:0033263 CORVET complex CC
GO:0034058 endosomal vesicle fusion BP
GO:0035542 regulation of SNARE complex assembly BP
GO:0042144 vacuole fusion, non-autophagic BP
GO:0042176 regulation of protein catabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043254 regulation of protein-containing complex assembly BP
GO:0044087 regulation of cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044437 obsolete vacuolar part CC
GO:0044440 obsolete endosomal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045732 positive regulation of protein catabolic process BP
GO:0046903 secretion BP
GO:0046907 intracellular transport BP
GO:0048278 vesicle docking BP
GO:0048284 organelle fusion BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051049 regulation of transport BP
GO:0051050 positive regulation of transport BP
GO:0051128 regulation of cellular component organization BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051246 regulation of protein metabolic process BP
GO:0051247 positive regulation of protein metabolic process BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0060090 molecular adaptor activity MF
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060341 regulation of cellular localization BP
GO:0060627 regulation of vesicle-mediated transport BP
GO:0061024 membrane organization BP
GO:0061025 membrane fusion BP
GO:0065007 biological regulation BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0080171 lytic vacuole organization BP
GO:0090174 organelle membrane fusion BP
GO:0097576 vacuole fusion BP
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098796 membrane protein complex CC
GO:0098805 membrane CC
GO:0099023 vesicle tethering complex CC
GO:0099080 supramolecular complex CC
GO:0099081 supramolecular polymer CC
GO:0099512 supramolecular fiber CC
GO:0099513 polymeric cytoskeletal fiber CC
GO:0140029 exocytic process BP
GO:0140056 organelle localization by membrane tethering BP
GO:1901998 toxin transport BP
GO:1902115 regulation of organelle assembly BP
GO:1903362 regulation of protein catabolic process BP
GO:1903364 positive regulation of protein catabolic process BP
GO:1903649 regulation of cytoplasmic transport BP
GO:1903651 positive regulation of cytoplasmic transport BP
GO:2000641 regulation of early endosome to late endosome transport BP
GO:2000643 positive regulation of early endosome to late endosome transport BP