Basic Information
Gene Structure
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Domain
| Database | EntryID | E-Value | Start | end | InterPro ID | Description |
|---|
Regulation&Interaction
Annotation
Orthologous Group
| Orthologous ID | Species Number | All hits in PereRegDB | Hits of this species | Orthologous Detail |
|---|
Expression Profile
| DataSet | Number of Samples expressed(TPM>1) | Mean | Min | Max | Standard deviation(SD) | Coeffcient variation(CV) |
|---|
Pathway
| GO Term | Description | GO Category |
|---|---|---|
| GO:0000325 | plant-type vacuole | CC |
| GO:0001101 | response to acid chemical | BP |
| GO:0005575 | cellular_component | CC |
| GO:0005622 | intracellular anatomical structure | CC |
| GO:0005623 | obsolete cell | CC |
| GO:0005634 | nucleus | CC |
| GO:0005737 | cytoplasm | CC |
| GO:0005773 | vacuole | CC |
| GO:0005774 | vacuolar membrane | CC |
| GO:0005783 | endoplasmic reticulum | CC |
| GO:0006810 | transport | BP |
| GO:0006950 | response to stress | BP |
| GO:0006979 | response to oxidative stress | BP |
| GO:0008150 | biological_process | BP |
| GO:0008152 | metabolic process | BP |
| GO:0009058 | biosynthetic process | BP |
| GO:0009314 | response to radiation | BP |
| GO:0009411 | response to UV | BP |
| GO:0009416 | response to light stimulus | BP |
| GO:0009611 | response to wounding | BP |
| GO:0009628 | response to abiotic stimulus | BP |
| GO:0009629 | response to gravity | BP |
| GO:0009705 | plant-type vacuole membrane | CC |
| GO:0009719 | response to endogenous stimulus | BP |
| GO:0009725 | response to hormone | BP |
| GO:0009733 | response to auxin | BP |
| GO:0009753 | response to jasmonic acid | BP |
| GO:0009812 | flavonoid metabolic process | BP |
| GO:0009813 | flavonoid biosynthetic process | BP |
| GO:0009889 | regulation of biosynthetic process | BP |
| GO:0009914 | hormone transport | BP |
| GO:0009926 | auxin polar transport | BP |
| GO:0009962 | regulation of flavonoid biosynthetic process | BP |
| GO:0010033 | response to organic substance | BP |
| GO:0010224 | response to UV-B | BP |
| GO:0010817 | regulation of hormone levels | BP |
| GO:0012505 | endomembrane system | CC |
| GO:0016020 | membrane | CC |
| GO:0019222 | regulation of metabolic process | BP |
| GO:0031090 | organelle membrane | CC |
| GO:0031537 | regulation of anthocyanin metabolic process | BP |
| GO:0031540 | regulation of anthocyanin biosynthetic process | BP |
| GO:0042221 | response to chemical | BP |
| GO:0043226 | organelle | CC |
| GO:0043227 | membrane-bounded organelle | CC |
| GO:0043229 | intracellular organelle | CC |
| GO:0043231 | intracellular membrane-bounded organelle | CC |
| GO:0044422 | obsolete organelle part | CC |
| GO:0044424 | obsolete intracellular part | CC |
| GO:0044437 | obsolete vacuolar part | CC |
| GO:0044444 | obsolete cytoplasmic part | CC |
| GO:0044446 | obsolete intracellular organelle part | CC |
| GO:0044464 | obsolete cell part | CC |
| GO:0050789 | regulation of biological process | BP |
| GO:0050896 | response to stimulus | BP |
| GO:0051179 | localization | BP |
| GO:0051234 | establishment of localization | BP |
| GO:0060918 | auxin transport | BP |
| GO:0065007 | biological regulation | BP |
| GO:0065008 | regulation of biological quality | BP |
| GO:0071704 | organic substance metabolic process | BP |
| GO:0080090 | regulation of primary metabolic process | BP |
| GO:0098588 | bounding membrane of organelle | CC |
| GO:0098805 | membrane | CC |
| GO:1901576 | organic substance biosynthetic process | BP |
| GO:1901700 | response to oxygen-containing compound | BP |
| KEGG Term | Name | Description |
|---|---|---|
| map04712 | Circadian rhythm - plant | - |
| map01110 | Biosynthesis of secondary metabolites | - |
| map01110 | Biosynthesis of secondary metabolites | - |
| map01100 | Metabolic pathways | - |
| map00960 | Tropane, piperidine and pyridine alkaloid biosynthesis | - |
| map00945 | Stilbenoid, diarylheptanoid and gingerol biosynthesis | Stilbenoids are a group of phenolic compounds, biosynthetically interrelated through their common origin from a C6-C2-C6 intermediate, such as resveratol found in grapes. Stilbenoids can also exist as glycosides (e.g., piceid). Combretastatins are potentially useful stilbenoid natural products with known antitumor activity. Diarylheptanoid is a compound group having phenyl rings at 1,7 positions of n-heptane (C6-C7-C6), such as curcumin found in the ginger family. [6]-Gingerol is a major active component of ginger and has diverse pharmacologic effects. |
| map00941 | Flavonoid biosynthesis | Flavonoids are a major class of plant secondary metabolites that serves a multitude of functions including pigments and antioxidant activity. Flavonoids are synthesized from phenylpropanoid derivatives by condensation with malonyl-CoA. For example, condensation of p-coumaroyl-CoA (C6-C3) with three malonyl-CoA (C3) molecules results in naringenin chalcone with a diphenylpropane (C6-C3-C6) unit, which is converted to naringenin with the flavone (2-phenylchromen-4-one) backbone by conjugate ring closure. These and further modifications yield a variety of structural forms including chalcones, flavanones, dihyroflavonols, and flavans, anthocyanins, flavones and flavonols, and isoflavonoids. |